Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888475.1_cds_XP_016443078.1_38274
CDS Infomation

[gene=LOC107768466] [db_xref=GeneID:107768466] [protein=type I inositol polyphosphate 5-phosphatase 2-like isoform X2] [protein_id=XP_016443078.1] [location=complement(join(17853..17856,17944..18141,18424..18572,18787..18895,19006..19196,19660..20452,21418..21505,22438..22524,22618..22723,22798..22827))] [gbkey=CDS]
Sequence

ATGAAAACCAGGAGAGGAAAAAGATCAGAGGCATTTTGGCCTTCAATTGTGATGAAAAAA
TGGTTAAATATTCAGCCTAAGCTTTATGATTTTAGTGAAGATGAAGTTGACACTGAAACT
GAGAGTGAGGATGATGCATGTTCACTTAAAGATGAAATGGTGCATGAAGATCATTTTTGT
AGAACACCGGGGAAGCTTAATGAATGCCAGCCTCAAACTTCAGGGAAAACTTCAACCAAG
TATTCATCAAGACACAAAAGAGGGAAATCAGAAACTCTGAGAGTTCAATACATTAATACA
AAAGAAGTGAGCTTCCAAGAGGTAGTTCCTTTAAATGCTGGAAATGTACTGGGAGCAGAA
AATAGAAGGCCAATTCCAAAATGGGAGGCGATCATTCGCAGAACATTAAACCGAACAACA
GTAGAACCTGAAGCTAAGCTCAAAAGTTACAGTGCTCCACCGTCTCCAGTGTTAAGAACT
TCTCCTGCAGCTGATATAATTGCTGATGTTGTAAATACTACTACTGCACTAGATATAATT
GCAGAGGCGTCGATGGACACCACTTGCTTTGCTGGAGATAATATGATCAACCTAAGGAAG
AACCTGCAAATAAAGAGAATATATGGCATTGATTGTGATAGTCGGTTGGATTGGCCTGAA
CGTTCGCTTGATGCAACGCCTCAAGTTCTGTCTTCAACTTTTAACTTGAGGCGAGTATCG
AGCAGTTGTGCTCTTGCTTTTAAGAATCAGGATATTGGATTAGATGGTAGCAGGTTAAAA
AGAGGACACCAAAGTTCCGGAAACTTAGGGTTGCTTTTTATGGATCAACAAGAGGAGCCT
GAGGTACTTGATGCACTTTCTGATGGCTCTGATCAATTTTCTGAAGAGGAAAATGATTTT
TTCGAAGGATTCACAGAGTTCGAAGATGAAAGTTCACTTCTAACACATGAGGTGAATTCA
CGTCCGAGGTATATTCGTATTGTTAGTAAACAGATGGTTGGGATATATGTATCCGTTTGG
GTCCGTAGAAGGTTGAGAAGGCACATAAACAACTTGCAAGTCTCCTCCGTTGGAGTCGGT
TTAATGGGATACATGGGCAACAAGGGATCTGTTTCTGTGAGCATGTCTCTTTTCCAGTCA
AGGCTATGCTTTGTTTGTTCACATTTAACTTCTGGTCAAAAGGATGGCGCTGATCAAAGG
CGTAATGCTGATGTCTATGAGATTATGAGGCGCACACATTTCTCATCTGTATTCGACACA
GATGCAGATCAACCACAAACAATTCCATCTCATGATCAGATATTCTGGTTAGGAGATTTG
AATTATCGAATCAATATGTTGGATGCTGAGGTACGGAAGCTTGTCGCCAGAAAGCAATGG
GATGAACTTCTCAACTACGACGAGCTAACCAAAGAACTCCGAGGTGGCCATGTTTTTGCC
GGTTGGAAGGAAGGAGTGATTAACTTTGCACCAACATATAAATATGAAATCAACACCGAT
AGATATGTAGGAGAGACTCCAAGAGAAGGGGAGAAGAAGAGATCACCGGCTTGGTGTGAC
CGTATACTGTGGTTAGGGAAAGGTATAAAACAACTCTTTTACAAGAGAGCGGAAATAAGA
CTATCTGATCATCGGCCTGTAAGTTCAATGTTTTCAGTAGAAGTTGAAGTATTTGATCAC
CGAAAACTCCAGAGAGTCCTCAATGTTAACAGCGCCGCTGTACATCCTGAGATTCTACTA
GATAGTGAGGATTAG

Peptide Sequence

PEP ID

XP_016443078.1
PEP Infomation

PREDICTED: type I inositol polyphosphate 5-phosphatase 2-like isoform X2 [Nicotiana tabacum]
Sequence

MKTRRGKRSEAFWPSIVMKKWLNIQPKLYDFSEDEVDTETESEDDACSLKDEMVHEDHFC
RTPGKLNECQPQTSGKTSTKYSSRHKRGKSETLRVQYINTKEVSFQEVVPLNAGNVLGAE
NRRPIPKWEAIIRRTLNRTTVEPEAKLKSYSAPPSPVLRTSPAADIIADVVNTTTALDII
AEASMDTTCFAGDNMINLRKNLQIKRIYGIDCDSRLDWPERSLDATPQVLSSTFNLRRVS
SSCALAFKNQDIGLDGSRLKRGHQSSGNLGLLFMDQQEEPEVLDALSDGSDQFSEEENDF
FEGFTEFEDESSLLTHEVNSRPRYIRIVSKQMVGIYVSVWVRRRLRRHINNLQVSSVGVG
LMGYMGNKGSVSVSMSLFQSRLCFVCSHLTSGQKDGADQRRNADVYEIMRRTHFSSVFDT
DADQPQTIPSHDQIFWLGDLNYRINMLDAEVRKLVARKQWDELLNYDELTKELRGGHVFA
GWKEGVINFAPTYKYEINTDRYVGETPREGEKKRSPAWCDRILWLGKGIKQLFYKRAEIR
LSDHRPVSSMFSVEVEVFDHRKLQRVLNVNSAAVHPEILLDSED

Transcript Sequence

Gene sequence data has not been registered.